FIGURE 3: Change point analysis of mean relative abundances throughout the experiment. (A-L) Longitudinal depiction of the mean relative abundance throughout the experiment for the 12/15 bacteria that persistently colonized the gnotobiotic mice and were regulated in response to the CJE treatment. Change points are indicated with a red vertical line, segments are indicated with a green horizontal line. Figures for individual replicates are in the Supplementary Figures, a summary of changes and directions can be found in Table 1.