Microreviews, Review
A comparative approach to decipher intestinal animal-microbe associations
Keisuke Nakashima1
In this article, the authors comment on the study "Chitin-based barrier immunity and its loss predated mucus-colonization by indigenous gut microbiota" by Nakashima et al. (Nat Commun, 2018) that used comparative analyses of chordates to investigate the development of animal-microbe associations, suggesting that microbial colonization of the mucus layer over mammalian gastrointestinal epithelium was established upon the loss of ancestral chitin-based barrier immunity, providing insights into the establishment of these associations in an evolutionary context.
Pathways of host cell exit by intracellular pathogens
Antje Flieger1,#, Freddy Frischknecht2, Georg Häcker3, Mathias W. Hornef4, Gabriele Pradel5
This review provides an overview of the diverse host cell exit strategies employed by intracellular-living bacterial, fungal, and protozoan pathogens, highlighting the commonalities and system-specific variations of these strategies, and discussing potential microbial molecules involved in host cell exit as targets for future intervention approaches.
An unexpected benefit from E. coli: how enterobactin benefits host health
Aileen K. Sewell1,2, Min Han1,2 and Bin Qi1,2
In this article, the authors comment on the study "Microbial Siderophore Enterobactin Promotes Mitochondrial Iron Uptake and Development of the Host via Interaction with ATP Synthase" by Qi et al. (Cell, 2018) that uncovered a surprising role for the Escherichia coli-produced siderophore enterobactin (Ent) in facilitating iron uptake by the host, marking a major shift in the understanding of its function and indicating potential new benefits from commensal bacteria in aiding the host's iron homeostasis.
Protective roles of ginseng against bacterial infection
Ye-Ram Kim1 and Chul-Su Yang1
This review highlights the antibacterial effects of ginseng against pathogenic bacterial infections, discussing its regulation of pathogenic factors and proposing the therapeutic potential of ginseng as a natural antibacterial drug to address antibiotic resistance and toxicity in the context of global public health challenges.
A Cinderella story: how the vacuolar proteases Pep4 and Prb1 do more than cleaning up the cell’s mass degradation processes
Winnie Kerstens1,2 and Patrick Van Dijck1,2
This review summarizes the expanded roles of the Saccharomyces cerevisiae vacuolar proteases Pep4 and Prb1 in non-vacuolar activities outside of autophagy, such as programmed cell death, protection from harmful protein forms, and gene expression regulation. The potential implications of these findings for fungal biology and drug target discovery, including insights for mammalian cell studies, are highlighted, emphasizing the need for a deeper understanding of these molecular processes.
The biosynthesis of pyoverdines
Michael T. Ringel1 and Thomas Brüser1
This review provides an overview of pyoverdine biosynthesis, emphasizing the distinctive fluorophore shared by various pyoverdines derived from ferribactins and the role of periplasmic processes in the maturation and modification of these siderophores, critical for the growth and colonization of hosts by fluorescent pseudomonads.
Toxin release mediated by the novel autolysin Cwp19 in Clostridium difficile
Imane El Meouche1 and Johann Peltier2,3
In this article, the authors comment on the study "Cwp19 is a novel lytic transglycosylase involved in stationary-phase autolysis resulting in toxin release in Clostridium difficile" by Wydau-Dematteis (MBio, 2018) that characterizes a novel peptidoglycan hydrolase, Cwp19, in Clostridioides difficile, highlighting its glucose-dependent mediation of toxins secretion and suggesting a potential role in the pathogenesis of this bacterium, contributing to the understanding of these enzymes in C. difficile and their implication in pathogenicity.
Massive gene swamping among cheese-making Penicillium fungi
March 3, 2014
This article comments on work published by Cheeseman et al. (Nat Comm, 2014), which indicates that horizontal gene transfer is a crucial mechanism of rapid adaptation, even among eukaryotes.
Genome-wide studies of telomere biology in budding yeast
March 1, 2014
In the last decade, technical advances have allowed carrying out systematic genome-wide screens for mutants affecting various aspects of telomere biology. In this review we summarize these efforts, and the insights that this Systems Biology approach has produced so far.
Mnemons: encoding memory by protein super-assembly
February 25, 2014
This article comments on work published by Caudron and Barral (Cell, 2013), which proposes that polyQ- and polyN-based elements, termed mnemons, act as cellular memory devices to encode previous environmental conditions.
Intersubunit communications within KaiC hexamers contribute the robust rhythmicity of the cyanobacterial circadian clock
January 29, 2014
This article comments on work published by Kitayama et al. (Nat Comm, 2013), which suggests that intersubunit communication precisely synchronizes KaiC subunits to avoid dephasing, and contributes to the robustness of circadian rhythms in cyanobacteria.
Mitochondrial protein import under kinase surveillance
January 29, 2014
This article summarizes recent discoveries in the yeast Saccharomyces cerevisiae model system that point towards a vital role of reversible phosphorylation in regulation of mitochondrial protein import.
Building a flagellum in biological outer space
January 25, 2014
This article comments on work published by Evans et al. (Nature, 2013), which presents a simple and elegant transit mechanism in which growth is powered by the subunits themselves as they link head-to-tail in a chain that is pulled through the length of the growing structure to the tip. This new mechanism answers an old question and may have resonance in other assembly processes.
A novel mechanism involved in the coupling of mitochondrial biogenesis to oxidative phosphorylation
January 5, 2014
This article comments on a study by Ostojić et al. (Cell Metabolism, 2013), which has uncovered a regulatory loop by which the biogenesis of a major enzyme of the OXPHOS pathway, the respiratory complex III, is coupled to the energy producing activity of the mitochondria.
Identifying the assembly pathway of cyanophage inside the marine bacterium using electron cryo-tomography
January 4, 2014
Thiswork comments on a study by Dai et al. (Nature 2013) that illustrates that electron cryo-tomography is an approach whereby one can capture directly structural snapshots of transient phage assembly intermediates during maturation process. Such analysis can be generalizable not only to human viruses in human cells but also various molecular machines undergoing biological processes.